Appl Environ
Microbiol 2009,75(22):7268–7270.Elafibranor order PubMedCrossRef 9. Mengoni A, Grassi E, Bazzicalupo M: Cloning method for taxonomic interpretation of T-RFLP patterns. Biotechniques 2002,33(5):990–992.PubMed 10. Grant A, Ogilvie LA: Name that microbe: rapid identification of taxa responsible for individual fragments in fingerprints of microbial check details community structure. Molecular Ecology Notes 2004,4(1):133–136.CrossRef 11. Mao Y, Yannarell AC, Mackie RI: Changes in N-transforming archaea and bacteria in soil during the establishment of bioenergy crops. PLoS One 2011,6(9):e24750.PubMedCrossRef 12. Ronaghi M: Pyrosequencing sheds light on DNA sequencing. Genome Res 2001,11(1):3–11.PubMedCrossRef 13. Sun Y, Wolcott RD, Dowd SE: Tag-encoded FLX amplicon pyrosequencing for the elucidation of microbial and functional gene diversity in any environment. Methods Mol Biol 2011, 733:129–141.PubMedCrossRef 14. Petrosino JF, Highlander S, Luna RA, Gibbs RA, Versalovic J: Metagenomic pyrosequencing and microbial identification. Clin Chem 2009,55(5):856–866.PubMedCrossRef 15. Roesch LFW, Fulthorpe RR, Riva A, Casella G, Hadwin AKM, Kent AD, Daroub SH, buy MK-4827 Camargo
FAO, Farmerie WG, Triplett EW: Pyrosequencing enumerates and contrasts soil microbial diversity. ISME J 2007,1(4):283–290.PubMed 16. Wommack KE, Bhavsar J, Ravel J: Metagenomics: read length matters. Appl Environ Microbiol 2008,74(5):1453–1463.PubMedCrossRef 17. Pilloni G, Granitsiotis MS, Engel M, Lueders T: Testing the limits of 454 pyrotag sequencing: reproducibility, quantitative assessment and comparison to T-RFLP fingerprinting of aquifer microbes. PLoS One 2012,7(7):e40467.PubMedCrossRef 18. Glenn TC: Field guide to next-generation DNA sequencers. Mol Ecol Resour 2011,11(5):759–769.PubMedCrossRef ever 19. Trombetti
GA, Bonnal RJP, Rizzi E, De Bellis G, Milanesi L: Data handling strategies for high throughput pyrosequencers. BMC Bioinforma 2007,8(1):S22.CrossRef 20. Kunin V, Copeland A, Lapidus A, Mavromatis K, Hugenholtz P: A Bioinformatician′s guide to metagenomics. Microbiol Mol Biol Rev 2008,72(4):557–578.PubMedCrossRef 21. Rodriguez-Ezpeleta N, Hackenberg M, Aransay AM: Bioinformatics for High Throughput Sequencing. Springer, New York; 2012.CrossRef 22. Edwards RA: The smallest cells pose the biggest problems: high-performance computing and the analysis of metagenome sequence data. JPCS 2008, 125:012050. 23. Desai N, Antonopoulos D, Gilbert JA, Glass EM, Meyer F: From genomics to metagenomics. Curr Opin Biotechnol 2012,23(1):72–76.PubMedCrossRef 24. Camarinha-Silva A, Wos-Oxley ML, Jauregui R, Becker K, Pieper DH: Validating T-RFLP as a sensitive and high-throughput approach to assess bacterial diversity patterns in human anterior nares. FEMS Microbiol Ecol 2012,79(1):98–108.PubMedCrossRef 25.