Neighbor-joining, maximum parsimony and maximum-likelihood phylogenetic trees of the individual

gene sequences were generated in MEGA5 by using the optimal model parameters and the option of complete deletion to eliminate positions containing gaps. Confidence levels for the branching points were determined using 1,000 bootstrap replicates. Bioinformatics and statistical LY3023414 analysis Searches for sequence similarity in the NCBI databases were carried out using BLAST algorithms [42]. Genome and nucleotide sequences were visualized and manipulated using the Artemis genome browser [46] and compared using ACT [47] in combination with WebACT [48]. The statistical analysis of incidence was performed by SAS9.2 software (SAS Institute Inc.) by Enterprise Guide 4.2 using generalized linear model analysis. The β-galactosidase and the necrotic area data were statistically analyzed using an analysis of variance, followed by Fisher’s Gemcitabine least significant difference test (p = 0.05), and for β-galactosidase activity on P. protegens Pf5, a Student’s t-test was carried out (p = 0.05), using the IBM.SSPS 19 software (IBM® Company). Results Involvement of mbo genes in mangotoxin production and virulence in P. syringae pv. syringae

UMAF0158 Six mangotoxin deficient mutants of P. syringae pv. syringae UMAF0158, were previously obtained and characterized for mangotoxin selleck compound production (Table 1 and Figure 1). Mangotoxin characterization showed that although these mutants did not show mangotoxin production, a slight production of a yet unknown antimicrobial compound was observed for mutants 4βA2 (mboB) and 5αC5 (mboD) (Figure 1). For two mutants (3γH1 and 6γF6), the Tn5 insertion was located in mgoC and mgoA respectively. Two other non-mangotoxin producing mutants were disrupted in the genes encoding the GacS/GacA two-component regulatory system (3αE10 and 2βB7 respectively). Growth of the mgoA mutant was shown to be similar

to that of the wild type strain, with cell densities of up to 1011 cfu ml-1 in liquid medium after 108 h of growth at 22ºC (Additional file 2: Figure S1A). In contrast, the gacA mutant presented an altered growth, with cell densities in the stationary phase reaching only 109 cfu ml-1 (Additional file 2: Figure S1A). The dynamics of the mangotoxin production in relation to bacterial growth was followed during four days of incubation. Flucloronide Mangotoxin production was detectable after 24 h of growth, increased up to 1.4 toxic units (T.U.), then reduced slightly upon entry of the stationary phase and then stabilized (Additional file 2: Figure S1B). Figure 1 Mangotoxin production by random miniTn 5 insertional mutants. Three pairs of mutants in different genes of the mbo and mgo operon, and in the gacS/gacA two-component regulatory system, obtained in previous works and tested for mangotoxin production. The corresponding disrupted gene is detailed in brackets. The P. syringae pv.